1KLQ Cell Cycle date Dec 12, 2001
title The Mad2 Spindle Checkpoint Protein Undergoes Similar Major Conformational Changes Upon Binding To Either Mad1 Or Cdc20
authors X.Luo, Z.Tang, J.Rizo, H.Yu
compound source
Molecule: Mitotic Spindle Assembly Checkpoint Protein Mad2a
Chain: A
Fragment: Missing N-Terminal 10 Residues
Synonym: Mad2; Spindle Checkpoint Protein Mad2; Mad2-Like 1 Mitotic Feedback Control Protein Madp2;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: M15[Prep4]
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pqe-30

Molecule: Mad2-Binding Peptide
Chain: B
Synonym: Mbp1
Engineered: Yes
Other_details: Synthetic 12-Mer

Synthetic: Yes
Other_details: This Sequence Is Identified Using Phage Disp
methodSolution NMR
related structures by homologous chain: 1DUJ
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe Mad2 spindle checkpoint protein undergoes similar major conformational changes upon binding to either Mad1 or Cdc20., Luo X, Tang Z, Rizo J, Yu H, Mol Cell 2002 Jan;9(1):59-71. PMID:11804586
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (60 Kb) [Save to disk]
  • Biological Unit Coordinates (1klq.pdb1.gz) 55 Kb
  • CSU: Contacts of Structural Units for 1KLQ
  • Original NMR restraints for 1KLQ from PDB
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1KLQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1KLQ from S2C, [Save to disk]
  • View 1KLQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1KLQ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1KLQ, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1klqa_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1klq_A] [1klq_B] [1klq]
  • SWISS-PROT database: [Q13257]
  • Domain organization of [MD2L1_HUMAN] by SWISSPFAM
  • Other resources with information on 1KLQ
  • Community annotation for 1KLQ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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