1KVJ Hydrolase date Jan 26, 2002
title Solution Structure Of The Cu(I) Bound Form Of The First Heav Binding Motif Of The Menkes Protein
authors T.M.De Silva, G.Veglia, S.J.Opella
compound source
Molecule: Copper-Transporting Atpase 1
Chain: A
Fragment: Residues 1-79
Synonym: Menkes Disease-Associated Protein
Ec: 3.6.3.4
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21de3
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pmal
methodSolution NMR
ligand CU1 enzyme Hydrolase E.C.3.6.3.4 BRENDA
related structures by homologous chain: 1KVI
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSolution structures of the reduced and Cu(I) bound forms of the first metal binding sequence of ATP7A associated with Menkes disease., DeSilva TM, Veglia G, Opella SJ, Proteins. 2005 Dec 1;61(4):1038-49. PMID:16211579
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (203 Kb) [Save to disk]
  • Biological Unit Coordinates (1kvj.pdb1.gz) 20 Kb
  • LPC: Ligand-Protein Contacts for 1KVJ
  • CSU: Contacts of Structural Units for 1KVJ
  • Original NMR restraints for 1KVJ from PDB
  • Retrieve 1KVJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1KVJ from S2C, [Save to disk]
  • View 1KVJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1KVJ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1KVJ, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1kvja_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1kvj_A] [1kvj]
  • SWISS-PROT database: [Q04656]
  • Belongs to the p-type atpase (p-atpase) superfamily according to TCDB.
  • Domain organization of [ATP7A_HUMAN] by SWISSPFAM
  • Other resources with information on 1KVJ
  • Community annotation for 1KVJ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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