1KXJ The Crystal Structure of Glutamine Amidotransferase from Thermotoga maritima date
authors Korolev, S., Skarina, T., Evdokimova, E., Beasley, S., Edwards, A., Joachimiak, A., Savchenko, A., MCSG, Midwest.Center.for.Structural.Genomics.
compound source
symmetry
R_factor
R_Free 0.274
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.80
ligand PO4 enzyme
related structures by homologous chain: 1GPW
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCrystal structure of glutamine amidotransferase from Thermotoga maritima., Korolev S, Skarina T, Evdokimova E, Beasley S, Edwards A, Joachimiak A, Savchenko A, Proteins 2002 Nov 15;49(3):420-2. PMID:12360532
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (71 Kb) [Save to disk]
  • Biological Unit Coordinates (1kxj.pdb1.gz) 35 Kb
  • Biological Unit Coordinates (1kxj.pdb2.gz) 34 Kb
  • LPC: Ligand-Protein Contacts for 1KXJ
  • CSU: Contacts of Structural Units for 1KXJ
  • Likely Quarternary Molecular Structure file(s) for 1KXJ
  • Structure Factors (248 Kb)
  • Retrieve 1KXJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1KXJ from S2C, [Save to disk]
  • Re-refined 1kxj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1KXJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1KXJ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1KXJ, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1kxja_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1kxjb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1kxj] [1kxj_A] [1kxj_B]
  • SWISS-PROT database: [Q9X0C8]
  • Domain organization of [HIS5_THEMA] by SWISSPFAM
  • Other resources with information on 1KXJ
  • Community annotation for 1KXJ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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