1LFH Iron Transport date Sep 04, 1991
title Molecular Replacement Solution Of The Structure Of Apolactof Protein Displaying Large-Scale Conformational Change
authors B.F.Anderson, E.N.Baker, G.E.Norris
compound source
Molecule: Lactoferrin
Chain: A
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 21 21 21
R_factor
R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
152.090 94.580 55.790 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.80 Å
ligand CL enzyme
related structures by homologous chain: 1BLF, 1F9B
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceMolecular replacement solution of the structure of apolactoferrin, a protein displaying large-scale conformational change., Norris GE, Anderson BF, Baker EN, Acta Crystallogr B 1991 Dec 1;47 ( Pt 6):998-1004. PMID:1772635
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (122 Kb) [Save to disk]
  • Biological Unit Coordinates (1lfh.pdb1.gz) 117 Kb
  • LPC: Ligand-Protein Contacts for 1LFH
  • CSU: Contacts of Structural Units for 1LFH
  • Likely Quarternary Molecular Structure file(s) for 1LFH
  • Structure Factors (128 Kb)
  • Retrieve 1LFH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1LFH from S2C, [Save to disk]
  • Re-refined 1lfh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1LFH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1LFH
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1LFH, from MSDmotif at EBI
  • Genome occurence of 1LFH's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1lfh_1, region 1-334 [Jmol] [rasmolscript] [script source]
        - Domain d1lfh_2, region 335-691 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1lfh] [1lfh_A]
  • SWISS-PROT database: [P02788]
  • Domain organization of [TRFL_HUMAN] by SWISSPFAM
  • Domain found in 1LFH: [TR_FER ] by SMART
  • Other resources with information on 1LFH
  • Community annotation for 1LFH at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 1LFH from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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