1LL8 Transferase date Apr 26, 2002
title Structure And Interactions Of Pas Kinase N-Terminal Pas Doma For Intramolecular Kinase Regulation
authors C.A.Amezcua, S.M.Harper, J.Rutter, K.H.Gardner
compound source
Molecule: Pas Kinase
Chain: A
Fragment: Pas-A Domain
Ec: 2.7.1.37
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl-21(De3)
methodSolution NMR
ligand
enzyme Transferase E.C.2.7.1.37 BRENDA
Primary referenceStructure and interactions of PAS kinase N-terminal PAS domain: model for intramolecular kinase regulation., Amezcua CA, Harper SM, Rutter J, Gardner KH, Structure (Camb) 2002 Oct;10(10):1349-61. PMID:12377121
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (594 Kb) [Save to disk]
  • Biological Unit Coordinates (1ll8.pdb1.gz) 30 Kb
  • CSU: Contacts of Structural Units for 1LL8
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1LL8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1LL8 from S2C, [Save to disk]
  • View 1LL8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1LL8
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1LL8, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ll8a_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1ll8 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ll8_A] [1ll8]
  • SWISS-PROT database: [Q96RG2]
  • Domain organization of [PASK_HUMAN] by SWISSPFAM
  • Domain found in 1LL8: [PAS ] by SMART
  • Other resources with information on 1LL8
  • Community annotation for 1LL8 at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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