1M0P Structure of Dialkylglycine Decarboxylase Complexed with 1-Amino-1-phenylethanephosphonate date
authors Liu, W., Rogers, C.J., Fisher, A.J., Toney, M.D.
compound source
R_Free 0.2300000
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.60
ligand ELP, K, NA enzyme
related structures by homologous chain: 1DGD, 1DKA

Primary referenceAminophosphonate inhibitors of dialkylglycine decarboxylase: structural basis for slow binding inhibition., Liu W, Rogers CJ, Fisher AJ, Toney MD, Biochemistry 2002 Oct 15;41(41):12320-8. PMID:12369820
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (75 Kb) [Save to disk]
  • Biological Unit Coordinates (1m0p.pdb1.gz) 275 Kb
  • LPC: Ligand-Protein Contacts for 1M0P
  • CSU: Contacts of Structural Units for 1M0P
  • Likely Quarternary Molecular Structure file(s) for 1M0P
  • Retrieve 1M0P in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1M0P from S2C, [Save to disk]
  • View 1M0P in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1M0P
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1M0P, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1m0pa_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1m0p_A] [1m0p]
  • SWISS-PROT database: [P16932]
  • Domain organization of [DGDA_BURCE] by SWISSPFAM
  • Other resources with information on 1M0P
  • Community annotation for 1M0P at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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