OCA Atlas for 1M5E

1M5E

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

ACT, AM1, ZN BindingDB

enzyme

related structures

by homologous chain: 1MQD, 1P1O

Gene
Ontology

Chain	Function	Process	Component
A, C, B

Primary reference

Structural basis for AMPA receptor activation and ligand selectivity: crystal structures of five agonist complexes with the GluR2 ligand-binding core., Hogner A, Kastrup JS, Jin R, Liljefors T, Mayer ML, Egebjerg J, Larsen IK, Gouaux E, J Mol Biol 2002 Sep 6;322(1):93-109. PMID:12215417

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (147 Kb) [Save to disk]

Biological Unit Coordinates (1m5e.pdb1.gz) 94 Kb

Biological Unit Coordinates (1m5e.pdb2.gz) 99 Kb

Biological Unit Coordinates (1m5e.pdb3.gz) 142 Kb

LPC: Ligand-Protein Contacts for 1M5E

CSU: Contacts of Structural Units for 1M5E

Likely Quarternary Molecular Structure file(s) for 1M5E

Structure Factors (1214 Kb)

Retrieve 1M5E in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 1M5E from S2C, [Save to disk]

Re-refined 1m5e structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1M5E in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1m5e] [1m5e_A] [1m5e_B] [1m5e_C]

SWISS-PROT database: [P19491]

Domains found in 1M5E: [Lig_chan-Glu_bd] [PBPb] [PBPe ] by SMART

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