1M9K Oxidoreductase date Jul 29, 2002
title Human Endothelial Nitric Oxide Synthase With 7-Nitroindazole
authors R.J.Rosenfeld, E.D.Garcin, K.Panda, G.Andersson, A.Aberg, A.V.Wal D.J.Stuehr, J.A.Tainer, E.D.Getzoff
compound source
Molecule: Endothelial Nitric-Oxide Synthase
Chain: A, B
Fragment: Oxygenase Domain
Synonym: Ec-Nos, Nos, Type III, Nosiii, Endothelial Nos, En Constitutive Nos, Cnos;
Ec: 1.14.13.39
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 21
R_factor 0.196 R_Free 0.224
crystal
cell
length a length b length c angle alpha angle beta angle gamma
69.786 91.573 156.096 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.01 Å
ligand 7NI, HEM, ZN BindingDB enzyme Oxidoreductase E.C.1.14.13.39 BRENDA
related structures by homologous chain: 1M9Q, 1MMW
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceConformational changes in nitric oxide synthases induced by chlorzoxazone and nitroindazoles: crystallographic and computational analyses of inhibitor potency., Rosenfeld RJ, Garcin ED, Panda K, Andersson G, Aberg A, Wallace AV, Morris GM, Olson AJ, Stuehr DJ, Tainer JA, Getzoff ED, Biochemistry 2002 Nov 26;41(47):13915-25. PMID:12437348
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (142 Kb) [Save to disk]
  • Biological Unit Coordinates (1m9k.pdb1.gz) 136 Kb
  • LPC: Ligand-Protein Contacts for 1M9K
  • CSU: Contacts of Structural Units for 1M9K
  • Likely Quarternary Molecular Structure file(s) for 1M9K
  • Retrieve 1M9K in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1M9K from S2C, [Save to disk]
  • View 1M9K in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1M9K
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1M9K, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1m9ka_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1m9kb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1m9k_A] [1m9k_B] [1m9k]
  • SWISS-PROT database: [P29474]
  • Domain organization of [NOS3_HUMAN] by SWISSPFAM
  • Other resources with information on 1M9K
  • Community annotation for 1M9K at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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