1MCA Chemotaxis date Apr 02, 1991
title Modeling The Three-Dimensional Structure Of The Monocyte Chemo-Attractant And Activating Protein Mcaf(Slash)Mcp-1 On The Basis Of The Solution Structure Of Interleukin-8
authors A.M.Gronenborn, G.M.Clore
compound source
Molecule: Monocyte Chemoattractant And Activating Protein
Chain: A, B
Engineered: Yes
methodTheoretical Model
Primary referenceModeling the three-dimensional structure of the monocyte chemo-attractant and activating protein MCAF/MCP-1 on the basis of the solution structure of interleukin-8., Gronenborn AM, Clore GM, Protein Eng 1991 Feb;4(3):263-9. PMID:1857712
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (38 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 1MCA
  • SEQRES to COORDINATES correlation for 1MCA from S2C, [Save to disk]
    • View 1MCA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • On AstexViewer, from MSD-EBI (viewer documentation).
  • On RasMol (Install RasMol freeware) Here's help on how to use RasMol.
    • Visual 3D analysis of 1MCA
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 1mca from FSSP and Dali (Families of Structurally Similar Proteins)
    • Sequence-derived information
  • SWISS-PROT database: [P13500]
  • Domain organization of [CCL2_HUMAN] by SWISSPFAM
  • Alignments of the sequence of 1MCA with the sequences similar proteins can be viewed for 1MCA's classification [CCL2_HUMAN] at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list.
  • A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification [CCL2_HUMAN] at ProtoMap. Click on the Cluster number.
    • Other resources with information on 1MCA
  • Community annotation for 1MCA at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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