1MCH PRINCIPLES AND PITFALLS IN DESIGNING SITE DIRECTED PEPTIDE LIGANDS date
authors Edmundson, A.B., Harris, D.L., Fan, Z.C., Guddat, L.W.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.70
ligand ACE, BAL enzyme
related structures by homologous chain: 1A8J, 2IG2
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referencePrinciples and pitfalls in designing site-directed peptide ligands., Edmundson AB, Harris DL, Fan ZC, Guddat LW, Schley BT, Hanson BL, Tribbick G, Geysen HM, Proteins 1993 Jul;16(3):246-67. PMID:8346191
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (63 Kb) [Save to disk]
  • Biological Unit Coordinates (1mch.pdb1.gz) 58 Kb
  • LPC: Ligand-Protein Contacts for 1MCH
  • CSU: Contacts of Structural Units for 1MCH
  • Likely Quarternary Molecular Structure file(s) for 1MCH
  • Retrieve 1MCH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1MCH from S2C, [Save to disk]
    • View 1MCH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1MCH
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1MCH, from MSDmotif at EBI
  • Genome occurence of 1MCH's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1mcha1, region A:1-111 [Jmol] [rasmolscript] [script source]
        - Domain d1mcha2, region A:112-216 [Jmol] [rasmolscript] [script source]
        - Domain d1mchb1, region B:1-111 [Jmol] [rasmolscript] [script source]
        - Domain d1mchb2, region B:112-216 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1mch_A] [1mch] [1mch_B] [1mch_P]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 1MCH: [IG_like] [IGv ] by SMART
    • Other resources with information on 1MCH
  • Community annotation for 1MCH at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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