1MFI Viral Protein date Aug 12, 1998
title Crystal Structure Of Macrophage Migration Inhibitory Factor With (E)-2-Fluoro-P-Hydroxycinnamate
authors A.B.Taylor, W.H.Johnson Jr., R.M.Czerwinski, C.P.Whitman, M.L.Ha
compound source
Molecule: Protein (Macrophage Migration Inhibitory Factor)
Chain: A, B, C
Synonym: Phenylpyruvate Tautomerase
Engineered: Yes
Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090
Gene: Mif
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)Plyss
Expression_system_plasmid: Pet11b
Expression_system_gene: Mumif
symmetry Space Group: H 3
R_factor 0.178 R_Free 0.227
crystal
cell
length a length b length c angle alpha angle beta angle gamma
99.530 99.530 105.690 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.80 Å
ligand FHC enzyme
related structures by homologous chain: 1GD0, 1GIF
Gene
Ontology
ChainFunctionProcessComponent
A, C, B
  • chemoattractant activity


  • Primary referenceCrystal structure of macrophage migration inhibitory factor complexed with (E)-2-fluoro-p-hydroxycinnamate at 1.8 A resolution: implications for enzymatic catalysis and inhibition., Taylor AB, Johnson WH Jr, Czerwinski RM, Li HS, Hackert ML, Whitman CP, Biochemistry 1999 Jun 8;38(23):7444-52. PMID:10360941
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (59 Kb) [Save to disk]
  • Biological Unit Coordinates (1mfi.pdb1.gz) 55 Kb
  • LPC: Ligand-Protein Contacts for 1MFI
  • CSU: Contacts of Structural Units for 1MFI
  • Likely Quarternary Molecular Structure file(s) for 1MFI
  • Retrieve 1MFI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1MFI from S2C, [Save to disk]
  • View 1MFI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1MFI
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1MFI, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1mfia_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1mfib_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1mfic_, region C [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1mfi_C] [1mfi] [1mfi_A] [1mfi_B]
  • SWISS-PROT database: [P34884]
  • Domain organization of [MIF_MOUSE] by SWISSPFAM
  • Other resources with information on 1MFI
  • Community annotation for 1MFI at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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