1MJO METHIONINE HOLOREPRESSOR MUTANT (Q44K) PLUS COREPRESSOR (S-ADENOSYL METHIONINE) COMPLEXED TO THE MINIMAL MET CONSENSUS OPERATOR WITH THE CENTRAL TA STEP MUTATED TO AT date
authors Garvie, C.W., Phillips, S.E.V.
compound source
symmetry
R_factor
R_Free 0.2410000
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.10
ligand CA, SAM BindingDB enzyme
related structures by homologous chain: 1CMC, 1MJL
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceDirect and indirect readout in mutant Met repressor-operator complexes., Garvie CW, Phillips SE, Structure Fold Des 2000 Sep 15;8(9):905-14. PMID:10986458
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (102 Kb) [Save to disk]
  • Biological Unit Coordinates (1mjo.pdb1.gz) 95 Kb
  • LPC: Ligand-Protein Contacts for 1MJO
  • CSU: Contacts of Structural Units for 1MJO
  • Likely Quarternary Molecular Structure file(s) for 1MJO
  • Retrieve 1MJO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1MJO from S2C, [Save to disk]
  • View 1MJO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1MJO
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1MJO, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1mjoa_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1mjob_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1mjoc_, region C [Jmol] [rasmolscript] [script source]
        - Domain d1mjod_, region D [Jmol] [rasmolscript] [script source]
  • Fold representative 1mjo from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1mjo] [1mjo_A] [1mjo_C] [1mjo_F] [1mjo_G] [1mjo_B] [1mjo_D]
  • SWISS-PROT database: [P0A8U6]
  • Domain organization of [METJ_ECOLI] by SWISSPFAM
  • Other resources with information on 1MJO
  • Community annotation for 1MJO at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 1MJO from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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