1MJP Transcription Dna date Jan 29, 1998
title Methionine Aporepressor Mutant (Q44k) Complexed To The Minim Consensus Operator
authors C.W.Garvie, S.E.V.Phillips
compound source
Molecule: Consensus Operator Duplex
Chain: C
Engineered: Yes
Synthetic: Yes

Molecule: Consensus Operator Duplex
Chain: D
Engineered: Yes

Synthetic: Yes

Molecule: Methionine Repressor
Chain: A, B
Engineered: Yes
Mutation: Yes

Organism_scientific: Escherichia Coli
Organism_taxid: 562
Gene: Metj
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 62 2 2
R_factor 0.226 R_Free 0.309
crystal
cell
length a length b length c angle alpha angle beta angle gamma
118.390 118.390 83.710 90.00 90.00 120.00
method X-Ray Diffractionresolution 3.40 Å
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceDirect and indirect readout in mutant Met repressor-operator complexes., Garvie CW, Phillips SE, Structure Fold Des 2000 Sep 15;8(9):905-14. PMID:10986458
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (43 Kb) [Save to disk]
  • Biological Unit Coordinates (1mjp.pdb1.gz) 38 Kb
  • CSU: Contacts of Structural Units for 1MJP
  • Likely Quarternary Molecular Structure file(s) for 1MJP
  • Retrieve 1MJP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1MJP from S2C, [Save to disk]
  • View 1MJP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1MJP
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1MJP, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1mjpa_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1mjpb_, region B [Jmol] [rasmolscript] [script source]
  • Fold representative 1mjp from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1mjp_D] [1mjp_B] [1mjp] [1mjp_A] [1mjp_C]
  • SWISS-PROT database: [P0A8U6]
  • Domain organization of [METJ_ECOLI] by SWISSPFAM
  • Other resources with information on 1MJP
  • Community annotation for 1MJP at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 1MJP from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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