1MMQ	Metalloprotease	date	Mar 22, 1995
title	Matrilysin Complexed With Hydroxamate Inhibitor
authors	M.F.Browner, W.W.Smith, A.L.Castelhano
compound		source
Molecule: Matrilysin Chain: A Synonym: Mmp-9, Pump-1, Matrin Ec: 3.4.24.23 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Organ: Ovary Expression_system: Cricetulus Griseus Expression_system_common: Chinese Hamster Expression_system_taxid: 10029
symmetry	Space Group: P 31 2 1	R_factor 0.179 R_Free NULL
crystal cell	length a length b length c angle alpha angle beta angle gamma 61.900 61.900 88.000 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	1.90 Å
ligand	CA, RRS, ZN BindingDB	enzyme	Hydrolase E.C.3.4.24.23 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Matrilysin-inhibitor complexes: common themes among metalloproteases., Browner MF, Smith WW, Castelhano AL, Biochemistry 1995 May 23;34(20):6602-10. PMID:7756291

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (33 Kb) [Save to disk] Biological Unit Coordinates (1mmq.pdb1.gz) 28 Kb LPC: Ligand-Protein Contacts for 1MMQ CSU: Contacts of Structural Units for 1MMQ Likely Quarternary Molecular Structure file(s) for 1MMQ Retrieve 1MMQ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1MMQ from S2C, [Save to disk]

View 1MMQ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1MMQ

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1MMQ, from MSDmotif at EBI Genome occurence of 1MMQ's fold from GeneCensus Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1mmq__, region [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1mmq] [1mmq_A] SWISS-PROT database: [P09237] Domain organization of [MMP7_HUMAN] by SWISSPFAM Domain found in 1MMQ: [ZnMc ] by SMART

Other resources with information on 1MMQ

Community annotation for 1MMQ at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

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