1MSH	Cytokine (Chemotactic)	date	Jan 25, 1995
title	Solution Structure Of Gro(Slash)Melanoma Growth Stimulatory Activity Determined By 1h Nmr Spectroscopy
authors	K.S.Kim, I.Clark-Lewis, B.D.Sykes
compound		source
Molecule: Human Melanoma Growth Stimulatory Activity Chain: A, B Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606
method	Solution NMR
related structures	by homologous chain: 1MSG, 1QNK
Gene Ontology	Chain Function Process Component A, B receptor binding cytokine activity chemokine activity enzyme activator activity growth factor activity chemotaxis inflammatory response signal transduction G-protein coupled receptor s... nervous system development cell proliferation negative regulation of cell ... actin cytoskeleton organizat... intracellular signal transdu... positive regulation of catal... extracellular region extracellular space
Primary reference	Solution structure of GRO/melanoma growth stimulatory activity determined by 1H NMR spectroscopy., Kim KS, Clark-Lewis I, Sykes BD, J Biol Chem 1994 Dec 30;269(52):32909-15. PMID:7806518

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1238 Kb) [Save to disk] CSU: Contacts of Structural Units for 1MSH Retrieve 1MSH in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1MSH from S2C, [Save to disk]

View 1MSH in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz. On AstexViewer, from MSD-EBI (viewer documentation). On RasMol (Install RasMol freeware) Here's help on how to use RasMol.

Visual 3D analysis of 1MSH

Cartoon representation from PDB Cartoon Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute Genome occurence of 1MSH's fold from GeneCensus Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1msha_, region A [Jmol] [rasmolscript] [script source]     - Domain d1mshb_, region B [Jmol] [rasmolscript] [script source] Fold representative 1msh from FSSP and Dali (Families of Structurally Similar Proteins) Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1msh_A] [1msh_B] SWISS-PROT database: [P09341] Domain organization of [GROA_HUMAN] by SWISSPFAM Domain found in 1MSH: [SCY ] by SMART Alignments of the sequence of 1MSH with the sequences similar proteins can be viewed for 1MSH's classification [GROA_HUMAN] at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list. A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification [GROA_HUMAN] at ProtoMap. Click on the Cluster number.

Other resources with information on 1MSH

Community annotation for 1MSH at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Domain movements in 1MSH from the Database of Macromolecular Movements. Images from IMB Jena Image Library of Biological Macromolecules.

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