4DM0 TN5 transposase: 20MER OUTSIDE END 2 MN complex date
authors Klenchin, V.A., Lovell, S., Goryshin, I.Y., Reznikoff, W.R., Rayment, I.
compound source
R_Free 0.2028
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.50
ligand EDO, MN enzyme
note 4DM0 supersedes 1MUR, 1L1A
  • nuclease activity
  • endonuclease activity

  • Primary referenceTwo-metal active site binding of a Tn5 transposase synaptic complex., Lovell S, Goryshin IY, Reznikoff WR, Rayment I, Nat Struct Biol. 2002 Apr;9(4):278-81. PMID:11896402
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (198 Kb) [Save to disk]
  • Biological Unit Coordinates (4dm0.pdb1.gz) 379 Kb
  • LPC: Ligand-Protein Contacts for 4DM0
  • CSU: Contacts of Structural Units for 4DM0
  • Structure Factors (399 Kb)
  • Retrieve 4DM0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4DM0 from S2C, [Save to disk]
  • Re-refined 4dm0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4DM0 in 3D
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  • Visual 3D analysis of 4DM0
  • Cartoon representation from PDB Cartoon
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  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4DM0, from MSDmotif at EBI
  • Fold representative 4dm0 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4dm0_C] [4dm0_B] [4dm0_A] [4dm0]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4DM0
  • Community annotation for 4DM0 at PDBWiki (http://pdbwiki.org)
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