1MV4 De Novo Protein date Sep 24, 2002
title Tm9a251-284: A Peptide Model Of The C-Terminus Of A Rat Stri Tropomyosin
authors N.J.Greenfield, G.V.T.Swapna, Y.Huang, T.Palm, S.Graboski, G.T.Mo S.E.Hitchcock-Degregori
compound source
Molecule: Tropomyosin 1 Alpha Chain
Chain: A, B
Fragment: C-Terminal (Residues 251-284)
Synonym: Alpha-Tropomyosin
Engineered: Yes
 Organism_scientific: Rattus Norvegicus
Organism_common: Norway Rat
Organism_taxid: 10116
Tissue: Skeletal Muscle
Gene: Tpm1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Dh5
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pproex Hta
methodSolution NMR
related structures by homologous chain: 1KQL
Primary referenceThe structure of the carboxyl terminus of striated alpha-tropomyosin in solution reveals an unusual parallel arrangement of interacting alpha-helices., Greenfield NJ, Swapna GV, Huang Y, Palm T, Graboski S, Montelione GT, Hitchcock-DeGregori SE, Biochemistry 2003 Jan 28;42(3):614-9. PMID:12534273
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (199 Kb) [Save to disk]
  • Biological Unit Coordinates (1mv4.pdb1.gz) 20 Kb
  • CSU: Contacts of Structural Units for 1MV4
  • Original NMR restraints for 1MV4 from PDB
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1MV4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1MV4 from S2C, [Save to disk]
    • View 1MV4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1MV4
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1MV4, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1mv4a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1mv4b_, region B [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1mv4_B] [1mv4] [1mv4_A]
  • SWISS-PROT database: [P04692]
  • Domain organization of [TPM1_RAT] by SWISSPFAM
    • Other resources with information on 1MV4
  • Community annotation for 1MV4 at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science