1MVF	Immune System	date	Sep 25, 2002
title	Maze Addiction Antidote
authors	R.Loris, I.Marianovsky, J.Lah, T.Laeremans, H.Engelberg-Kulka, G. S.Muyldermans, L.Wyns
compound		source
Molecule: Immunoglobulin Heavy Chain Variable Region Chain: A, B Engineered: Yes		Organism_scientific: Camelus Dromedarius Organism_common: Arabian Camel Organism_taxid: 9838 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Pemi-Like Protein 1 Chain: D, E Synonym: Maze Protein Engineered: Yes		Organism_scientific: Escherichia Coli Organism_taxid: 562 Gene: Maze Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 1 21 1	R_factor 0.218 R_Free 0.249
crystal cell	length a length b length c angle alpha angle beta angle gamma 29.440 47.826 128.376 90.00 90.59 90.00
method	X-Ray Diffraction	resolution	1.65 Å
note	1MVF is a representative structure
related structures	by homologous chain: 1KXV, 1UB4
Gene Ontology	Chain Function Process Component D, E
Primary reference	Crystal structure of the intrinsically flexible addiction antidote MazE., Loris R, Marianovsky I, Lah J, Laeremans T, Engelberg-Kulka H, Glaser G, Muyldermans S, Wyns L, J Biol Chem 2003 Jul 25;278(30):28252-7. PMID:12743116

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (59 Kb) [Save to disk] Biological Unit Coordinates (1mvf.pdb1.gz) 29 Kb Biological Unit Coordinates (1mvf.pdb2.gz) 27 Kb CSU: Contacts of Structural Units for 1MVF Likely Quarternary Molecular Structure file(s) for 1MVF Structure Factors (547 Kb) Retrieve 1MVF in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1MVF from S2C, [Save to disk] Re-refined 1mvf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1MVF in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1MVF

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1MVF, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1mvfa_, region A [Jmol] [rasmolscript] [script source]     - Domain d1mvfb_, region B [Jmol] [rasmolscript] [script source]     - Domain d1mvfd_, region D [Jmol] [rasmolscript] [script source]     - Domain d1mvfe_, region E [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1mvf] [1mvf_A] [1mvf_E] [1mvf_B] [1mvf_D] SWISS-PROT database: [P0AE72] Domain organization of [CHPR_ECOLI] by SWISSPFAM Domains found in 1MVF: [IGv] [SpoVT_AbrB ] by SMART

Other resources with information on 1MVF

Community annotation for 1MVF at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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