1MVM Virus Dna date Jun 21, 1996
title Mvm(Strain I), Complex(Viral Coatdna), Vp2, Ph=7.5, T=4 Deg
authors A.L.Llamas-Saiz, M.Agbandje-Mckenna, M.G.Rossmann
compound source
Molecule: Protein (Murine Minute Virus Coat Protein)
Chain: A
Organism_scientific: Minute Virus Of Mice
Organism_taxid: 10794
Strain: Strain I (Immunosuppressive)
Cell_line: 549 Murine Lymphoma Cells

Molecule: Dna (5'-D(Cpcpapcpcpcpcpapapcpa)-3')
Chain: B
Engineered: Yes

Synthetic: Yes

Molecule: Dna (5'-D(Cpapapa)-3')
Chain: C
Engineered: Yes

Synthetic: Yes

Molecule: Dna (5'-D(A)-3')
Chain: D
Engineered: Yes

Synthetic: Yes
symmetry Space Group: C 1 2 1
length a length b length c angle alpha angle beta angle gamma
448.700 416.700 305.300 90.00 95.80 90.00
method X-Ray Diffractionresolution 3.50 Å
ligand DA enzyme

Primary referenceStructure determination of minute virus of mice., Llamas-Saiz AL, Agbandje-McKenna M, Wikoff WR, Bratton J, Tattersall P, Rossmann MG, Acta Crystallogr D Biol Crystallogr. 1997 Jan 1;53(Pt 1):93-102. PMID:15299974
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (90 Kb) [Save to disk]
  • Biological Unit Coordinates (1mvm.pdb1.gz) 4792 Kb
  • LPC: Ligand-Protein Contacts for 1MVM
  • CSU: Contacts of Structural Units for 1MVM
  • Likely Quarternary Molecular Structure file(s) for 1MVM
  • Retrieve 1MVM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1MVM from S2C, [Save to disk]
  • View 1MVM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1MVM
  • VIPERdb: visual, structural and computational analysis of 1MVM
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1MVM, from MSDmotif at EBI
  • Genome occurence of 1MVM's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1mvma_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1mvm from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1mvm_B] [1mvm] [1mvm_C] [1mvm_A] [1mvm_D]
  • SWISS-PROT database: [P07302]
  • Domain organization of [COAT_MUMIM] by SWISSPFAM
  • Other resources with information on 1MVM
  • Community annotation for 1MVM at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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