1N11 Structural Protein date Oct 16, 2002
title D34 Region Of Human Ankyrin-R And Linker
authors P.Michaely, D.R.Tomchick, M.Machius, R.G.W.Anderson
compound source
Molecule: Ankyrin
Chain: A
Fragment: D34 Region
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ank-1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: B834
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgex-Kg
symmetry Space Group: P 63 2 2
R_factor 0.319 R_Free 0.303
crystal
cell
length a length b length c angle alpha angle beta angle gamma
137.329 137.329 197.801 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.70 Å
ligand BR, CL enzyme
Primary referenceCrystal structure of a 12 ANK repeat stack from human ankyrinR., Michaely P, Tomchick DR, Machius M, Anderson RG, EMBO J 2002 Dec 2;21(23):6387-96. PMID:12456646
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (68 Kb) [Save to disk]
  • Biological Unit Coordinates (1n11.pdb1.gz) 63 Kb
  • LPC: Ligand-Protein Contacts for 1N11
  • CSU: Contacts of Structural Units for 1N11
  • Likely Quarternary Molecular Structure file(s) for 1N11
  • Structure Factors (310 Kb)
  • Retrieve 1N11 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1N11 from S2C, [Save to disk]
  • Re-refined 1n11 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1N11 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1N11
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1N11, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1n11a_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1n11 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1n11] [1n11_A]
  • SWISS-PROT database: [P16157]
  • Belongs to the ankyrin (ankyrin) family according to TCDB.
  • Domain organization of [ANK1_HUMAN] by SWISSPFAM
  • Domain found in 1N11: [ANK ] by SMART
  • Other resources with information on 1N11
  • Community annotation for 1N11 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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