1N5U Plasma Protein date Nov 07, 2002
title X-Ray Study Of Human Serum Albumin Complexed With Heme
authors M.Wardell, Z.Wang, J.X.Ho, J.Robert, F.Ruker, J.Ruble, D.C.Carter
compound source
Molecule: Serum Albumin
Chain: A
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: C 1 2 1
R_factor 0.235 R_Free 0.280
length a length b length c angle alpha angle beta angle gamma
183.116 37.909 94.832 90.00 105.04 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand HEM, MYR enzyme
related structures by homologous chain: 1E7A

Primary referenceThe atomic structure of human methemalbumin at 1.9 A., Wardell M, Wang Z, Ho JX, Robert J, Ruker F, Ruble J, Carter DC, Biochem Biophys Res Commun 2002 Mar 8;291(4):813-9. PMID:11866438
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (110 Kb) [Save to disk]
  • Biological Unit Coordinates (1n5u.pdb1.gz) 105 Kb
  • LPC: Ligand-Protein Contacts for 1N5U
  • CSU: Contacts of Structural Units for 1N5U
  • Likely Quarternary Molecular Structure file(s) for 1N5U
  • Structure Factors (604 Kb)
  • Retrieve 1N5U in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1N5U from S2C, [Save to disk]
  • Re-refined 1n5u structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1N5U in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1N5U
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1N5U, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1n5ua2, region A:197-388 [Jmol] [rasmolscript] [script source]
        - Domain d1n5ua1, region A:2-196 [Jmol] [rasmolscript] [script source]
        - Domain d1n5ua3, region A:389-584 [Jmol] [rasmolscript] [script source]
  • Fold representative 1n5u from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1n5u] [1n5u_A]
  • SWISS-PROT database: [P02768]
  • Domain organization of [ALBU_HUMAN] by SWISSPFAM
  • Domain found in 1N5U: [ALBUMIN ] by SMART
  • Other resources with information on 1N5U
  • Community annotation for 1N5U at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science