1N72 Transferase date Nov 12, 2002
title Structure And Ligand Of A Histone Acetyltransferase Bromodomain
authors C.Dhalluin, J.E.Carlson, L.Zeng, C.He, A.K.Aggarwal, M.M.Zhou
compound source
Molecule: Histone Acetyltransferase
Chain: A
Fragment: Bromodomain
Synonym: P300cbp-Associated Factor, Pcaf, Histone Acetylase Pcaf;
Ec: 2.3.1.48
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Pcaf
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet14b
methodSolution NMR
ligand
enzyme Transferase E.C.2.3.1.48 BRENDA
note 1N72 supersedes 1B91
related structures by homologous chain: 1JM4
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure and ligand of a histone acetyltransferase bromodomain., Dhalluin C, Carlson JE, Zeng L, He C, Aggarwal AK, Zhou MM, Nature. 1999 Jun 3;399(6735):491-6. PMID:10365964
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (35 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 1N72
  • Retrieve 1N72 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1N72 from S2C, [Save to disk]
  • View 1N72 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1N72
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1N72, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1n72a_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1n72 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1n72_A] [1n72]
  • SWISS-PROT database: [Q92831]
  • Domain organization of [KAT2B_HUMAN] by SWISSPFAM
  • Domain found in 1N72: [BROMO ] by SMART
  • Other resources with information on 1N72
  • Community annotation for 1N72 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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