1N89 Lipid Transport date Nov 20, 2002
title Solution Structure Of A Liganded Type 2 Wheat Non-Specific L Transfer Protein
authors J.L.Pons, F.De Lamotte, M.F.Gautier, M.A.Delsuc
compound source
Molecule: Lipid Transfer Protein
Chain: A
Engineered: Yes
Organism_scientific: Triticum Turgidum Subsp. Durum
Organism_common: Durum Wheat
Organism_taxid: 4567
Strain: Subsp. Durum
Expression_system: Pichia Pastoris
Expression_system_taxid: 4922
Expression_system_strain: Gs115
methodSolution NMR
ligand PGM enzyme
related structures by homologous chain: 1TUK
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceRefined solution structure of a liganded type 2 wheat nonspecific lipid transfer protein., Pons JL, de Lamotte F, Gautier MF, Delsuc MA, J Biol Chem 2003 Apr 18;278(16):14249-56. Epub 2003 Jan 13. PMID:12525478
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (150 Kb) [Save to disk]
  • Biological Unit Coordinates (1n89.pdb1.gz) 17 Kb
  • LPC: Ligand-Protein Contacts for 1N89
  • CSU: Contacts of Structural Units for 1N89
  • Original NMR restraints for 1N89 from PDB
  • Retrieve 1N89 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1N89 from S2C, [Save to disk]
  • View 1N89 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1N89
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1N89, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1n89a_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1n89 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1n89] [1n89_A]
  • SWISS-PROT database: [P82900] [Q9FEK9]
  • Domain organization of [NLT2G_WHEAT] [Q9FEK9_TRITU] by SWISSPFAM
  • Domain found in 1N89: [AAI ] by SMART
  • Other resources with information on 1N89
  • Community annotation for 1N89 at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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