1NRR	Hydrolase Hydrolase Inhibitor	date	Jan 18, 1994
title	Crystallographic Structures Of Thrombin Complexed With Throm Receptor Peptides: Existence Of Expected And Novel Binding
authors	A.Tulinsky, I.I.Mathews
compound		source
Molecule: Thrombin Light Chain Chain: L Fragment: Residues 328-363 Synonym: Coagulation Factor II Ec: 3.4.21.5		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606
Molecule: Thrombin Heavy Chain Chain: H Fragment: Residues 364-622 Synonym: Coagulation Factor II Ec: 3.4.21.5		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606
Molecule: Proteinase-Activated Receptor 1 Chain: R Fragment: Unp Residues 43-60 Synonym: Thrombin Receptor, Coagulation Factor II Receptor		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606
symmetry	Space Group: C 1 2 1	R_factor R_Free NULL
crystal cell	length a length b length c angle alpha angle beta angle gamma 71.300 72.200 72.300 90.00 100.00 90.00
method	X-Ray Diffraction	resolution	2.40 Å
ligand	0G6	enzyme	Hydrolase E.C.3.4.21.5 BRENDA
related structures	by homologous chain: 1ABJ, 1NRS
Gene Ontology	Chain Function Process Component H L
Primary reference	Crystallographic structures of thrombin complexed with thrombin receptor peptides: existence of expected and novel binding modes., Mathews II, Padmanabhan KP, Ganesh V, Tulinsky A, Ishii M, Chen J, Turck CW, Coughlin SR, Fenton JW 2nd, Biochemistry 1994 Mar 22;33(11):3266-79. PMID:8136362

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (57 Kb) [Save to disk] Biological Unit Coordinates (1nrr.pdb1.gz) 52 Kb LPC: Ligand-Protein Contacts for 1NRR CSU: Contacts of Structural Units for 1NRR Likely Quarternary Molecular Structure file(s) for 1NRR Retrieve 1NRR in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1NRR from S2C, [Save to disk]

View 1NRR in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1NRR

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1NRR, from MSDmotif at EBI Genome occurence of 1NRR's fold from GeneCensus Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1nrr.1, region L:,H [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1nrr_R] [1nrr] [1nrr_H] [1nrr_P] [1nrr_L] SWISS-PROT database: [P25116] [P00734] Domain organization of [PAR1_HUMAN] [THRB_HUMAN] by SWISSPFAM Domain found in 1NRR: [Tryp_SPc ] by SMART

Other resources with information on 1NRR

Community annotation for 1NRR at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---