1NS9 Oxygen Storage Transport date Jan 27, 2003
title The 1.6a Structure Of Horse Methemoglobin At Ph 7.1
authors V.L.Robinson, B.B.Smith, A.Arnone
compound source
Molecule: Hemoglobin Alpha Subunit
Chain: A
Fragment: Alpha Subunit
Other_details: Ph 7.1 Aquomet Structure
Organism_scientific: Equus Caballus
Organism_common: Horse
Organism_taxid: 9796

Molecule: Hemoglobin Beta Subunit
Chain: B
Fragment: Beta Subunit
Other_details: Ph 7.1 Aquomet Structure

Organism_scientific: Equus Caballus
Organism_common: Horse
Organism_taxid: 9796
symmetry Space Group: C 1 2 1
R_factor 0.180 R_Free 0.195
crystal
cell
length a length b length c angle alpha angle beta angle gamma
108.400 63.200 54.600 90.00 110.90 90.00
method X-Ray Diffractionresolution 1.60 Å
ligand HEM enzyme
related structures by homologous chain: 1J3Z, 1J7Y, 1WMU
Gene
Ontology
ChainFunctionProcessComponent
A


B
  • peroxidase activity


  • Primary referenceA pH-dependent aquomet-to-hemichrome transition in crystalline horse methemoglobin., Robinson VL, Smith BB, Arnone A, Biochemistry 2003 Sep 2;42(34):10113-25. PMID:12939139
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (53 Kb) [Save to disk]
  • Biological Unit Coordinates (1ns9.pdb1.gz) 93 Kb
  • LPC: Ligand-Protein Contacts for 1NS9
  • CSU: Contacts of Structural Units for 1NS9
  • Likely Quarternary Molecular Structure file(s) for 1NS9
  • Structure Factors (317 Kb)
  • Retrieve 1NS9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1NS9 from S2C, [Save to disk]
  • Re-refined 1ns9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1NS9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1NS9
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1NS9, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ns9a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1ns9b_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ns9] [1ns9_B] [1ns9_A]
  • SWISS-PROT database: [P01958] [P02062]
  • Domain organization of [HBA_HORSE] [HBB_HORSE] by SWISSPFAM
  • Other resources with information on 1NS9
  • Community annotation for 1NS9 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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