1ODA date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand BDU enzyme
Primary referenceStructure-guided design of sialic acid-based Siglec inhibitors and crystallographic analysis in complex with sialoadhesin., Zaccai NR, Maenaka K, Maenaka T, Crocker PR, Brossmer R, Kelm S, Jones EY, Structure (Camb) 2003 May;11(5):557-67. PMID:12737821
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (25 Kb) [Save to disk]
  • Biological Unit Coordinates (1oda.pdb1.gz) 20 Kb
  • LPC: Ligand-Protein Contacts for 1ODA
  • CSU: Contacts of Structural Units for 1ODA
  • Likely Quarternary Molecular Structure file(s) for 1ODA
  • Retrieve 1ODA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1ODA from S2C, [Save to disk]
  • View 1ODA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1oda] [1oda_A]
  • SWISS-PROT database: [Q62230]
  • Domain found in 1ODA: [IG ] by SMART

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