1OEL Chaperonin date Nov 21, 1995
title Conformational Variability In The Refined Structure Of The C Groel At 2.8 Angstrom Resolution
authors K.Braig, P.D.Adams, A.T.Brunger
compound source
Molecule: Groel (Hsp60 Class)
Chain: A, B, C, D, E, F, G
Engineered: Yes
Mutation: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 562
Strain: Dh5
Gene: Groel
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Bacterial
Expression_system_plasmid: Iq-Trc
Expression_system_gene: Groel
Other_details: Over-Expression Plasmid
symmetry Space Group: C 2 2 21
R_factor 0.227 R_Free 0.270
crystal
cell
length a length b length c angle alpha angle beta angle gamma
178.380 204.980 280.980 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.80 Å
related structures by homologous chain: 1SS8, 1WE3
Gene
Ontology
ChainFunctionProcessComponent
F, A, D, C, G, E, B


Primary referenceConformational variability in the refined structure of the chaperonin GroEL at 2.8 A resolution., Braig K, Adams PD, Brunger AT, Nat Struct Biol 1995 Dec;2(12):1083-94. PMID:8846220
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (539 Kb) [Save to disk]
  • Biological Unit Coordinates (1oel.pdb1.gz) 1064 Kb
  • CSU: Contacts of Structural Units for 1OEL
  • Likely Quarternary Molecular Structure file(s) for 1OEL
  • Retrieve 1OEL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1OEL from S2C, [Save to disk]
  • View 1OEL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1OEL
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1OEL, from MSDmotif at EBI
  • Genome occurence of 1OEL's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1oela3, region A:137-190,A:367-409 [Jmol] [rasmolscript] [script source]
        - Domain d1oela2, region A:191-366 [Jmol] [rasmolscript] [script source]
        - Domain d1oela1, region A:2-136,A:410-525 [Jmol] [rasmolscript] [script source]
        - Domain d1oelb3, region B:137-190,B:367-409 [Jmol] [rasmolscript] [script source]
        - Domain d1oelb2, region B:191-366 [Jmol] [rasmolscript] [script source]
        - Domain d1oelb1, region B:2-136,B:410-525 [Jmol] [rasmolscript] [script source]
        - Domain d1oelc4, region C:137-190,C:367-409 [Jmol] [rasmolscript] [script source]
        - Domain d1oelc3, region C:191-366 [Jmol] [rasmolscript] [script source]
        - Domain d1oelc5, region C:2-136,C:410-525 [Jmol] [rasmolscript] [script source]
        - Domain d1oeld3, region D:137-190,D:367-409 [Jmol] [rasmolscript] [script source]
        - Domain d1oeld2, region D:191-366 [Jmol] [rasmolscript] [script source]
        - Domain d1oeld1, region D:2-136,D:410-525 [Jmol] [rasmolscript] [script source]
        - Domain d1oele3, region E:137-190,E:367-409 [Jmol] [rasmolscript] [script source]
        - Domain d1oele2, region E:191-366 [Jmol] [rasmolscript] [script source]
        - Domain d1oele1, region E:2-136,E:410-525 [Jmol] [rasmolscript] [script source]
        - Domain d1oelf3, region F:137-190,F:367-409 [Jmol] [rasmolscript] [script source]
        - Domain d1oelf2, region F:191-366 [Jmol] [rasmolscript] [script source]
        - Domain d1oelf1, region F:2-136,F:410-525 [Jmol] [rasmolscript] [script source]
        - Domain d1oelg3, region G:137-190,G:367-409 [Jmol] [rasmolscript] [script source]
        - Domain d1oelg2, region G:191-366 [Jmol] [rasmolscript] [script source]
        - Domain d1oelg1, region G:2-136,G:410-525 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1oel_A] [1oel_G] [1oel_C] [1oel] [1oel_D] [1oel_B] [1oel_F] [1oel_E]
  • SWISS-PROT database: [P0A6F5]
  • Domain organization of [CH60_ECOLI] by SWISSPFAM
  • Other resources with information on 1OEL
  • Community annotation for 1OEL at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 1OEL from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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