1OJ5	Transcriptional Coactivator	date	Jul 02, 2003
title	Crystal Structure Of The Nco-A1 Pas-B Domain Bound To The Stat6 Transactivation Domain Lxxll Motif
authors	A.Razeto, V.Ramakrishnan, K.Giller, N.Lakomek, T.Carlomagno, C.Griesinger, M.Lodrini, C.M.Litterst, E.Pftizner, S.Becker
compound		source
Molecule: Steroid Receptor Coactivator 1a Chain: A Fragment: Nco-A1 Pas-B Domain, Residues 257-385 Synonym: Steroid Receptor Coactivator-1, Ncoa1, Src1a Engineered: Yes Mutation: Yes		Organism_scientific: Mus Musculus Organism_common: Mouse Organism_taxid: 10090 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector: Pet16btev Expression_system_plasmid: Pet16btev-Ncoa-1 Other_details: Cellular Location\: Nucleus
Molecule: Signal Transducer And Activator Of Transcription 6; Chain: B Fragment: Stat6 Lxxll Motif, Residues 795-808 Synonym: Il-4 Stat		Synthetic: Yes Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606
symmetry	Space Group: P 62	R_factor 0.166 R_Free 0.214
crystal cell	length a length b length c angle alpha angle beta angle gamma 62.100 62.100 73.400 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.2 Å
ligand	IOD	enzyme
note	1OJ5 is a representative structure
Gene Ontology	Chain Function Process Component A
Primary reference	Structure of the NCoA-1/SRC-1 PAS-B domain bound to the LXXLL motif of the STAT6 transactivation domain., Razeto A, Ramakrishnan V, Litterst CM, Giller K, Griesinger C, Carlomagno T, Lakomek N, Heimburg T, Lodrini M, Pfitzner E, Becker S, J Mol Biol 2004 Feb 13;336(2):319-29. PMID:14757047

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (27 Kb) [Save to disk] Biological Unit Coordinates (1oj5.pdb1.gz) 22 Kb LPC: Ligand-Protein Contacts for 1OJ5 CSU: Contacts of Structural Units for 1OJ5 Likely Quarternary Molecular Structure file(s) for 1OJ5 Structure Factors (100 Kb) Retrieve 1OJ5 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1OJ5 from S2C, [Save to disk] Re-refined 1oj5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1OJ5 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1OJ5

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1OJ5, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1oj5a_, region A [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1oj5_A] [1oj5_B] [1oj5] SWISS-PROT database: [P70365] [P42226] Domain organization of [NCOA1_MOUSE] [STAT6_HUMAN] by SWISSPFAM

Other resources with information on 1OJ5

Community annotation for 1OJ5 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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