1OKC Transport Protein date Jul 21, 2003
title Structure Of Mitochondrial Adpatp Carrier In Complex With Carboxyatractyloside
authors E.Pebay-Peyroula, C.Dahout-Gonzalez, R.Kahn, V.Trezeguet, G.J.M.Lauquin, G.Brandolin
compound source
Molecule: Adp, Atp Carrier Protein Heart Isoform T1
Chain: A
Synonym: Adpatp Translocase 1, Adenine Nucleotide Translocator 1, Ant 1
Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
Organ: Heart
Tissue: Muscle
symmetry Space Group: P 21 21 2
R_factor 0.220 R_Free 0.266
crystal
cell
length a length b length c angle alpha angle beta angle gamma
85.437 83.463 49.922 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.2 Å
ligand CDL, CXT, LDM, PC1 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside., Pebay-Peyroula E, Dahout-Gonzalez C, Kahn R, Trezeguet V, Lauquin GJ, Brandolin G, Nature 2003 Nov 6;426(6962):39-44. PMID:14603310
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (61 Kb) [Save to disk]
  • Biological Unit Coordinates (1okc.pdb1.gz) 55 Kb
  • LPC: Ligand-Protein Contacts for 1OKC
  • CSU: Contacts of Structural Units for 1OKC
  • Likely Quarternary Molecular Structure file(s) for 1OKC
  • Structure Factors (138 Kb)
  • Retrieve 1OKC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1OKC from S2C, [Save to disk]
  • Re-refined 1okc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1OKC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1OKC
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1OKC, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1okca_, region A [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1okc] [1okc_A]
  • SWISS-PROT database: [P02722]
  • Domain organization of [ADT1_BOVIN] by SWISSPFAM
  • Other resources with information on 1OKC
  • Community annotation for 1OKC at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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