1OLG Anti-Oncogene date Jun 13, 1994
title High-Resolution Solution Structure Of The Oligomerization Domain Of P53 By Multi-Dimensional Nmr
authors G.M.Clore, J.G.Omichinski, A.M.Gronenborn
compound source
Molecule: Tumor Suppressor P53 (Oligomerization Domain)
Chain: A, B, C, D
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
methodSolution NMR
note 1OLG (Molecule of the Month:pdb31)
Primary referenceHigh-resolution structure of the oligomerization domain of p53 by multidimensional NMR., Clore GM, Omichinski JG, Sakaguchi K, Zambrano N, Sakamoto H, Appella E, Gronenborn AM, Science 1994 Jul 15;265(5170):386-91. PMID:8023159
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (55 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 1OLG
  • Original NMR restraints for 1OLG from PDB
  • Retrieve 1OLG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1OLG from S2C, [Save to disk]
  • View 1OLG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1OLG
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1OLG, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1olga_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1olgb_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1olgc_, region C [Jmol] [rasmolscript] [script source]
        - Domain d1olgd_, region D [Jmol] [rasmolscript] [script source]
  • Fold representative 1olg from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1olg_C] [1olg_D] [1olg] [1olg_A] [1olg_B]
  • SWISS-PROT database: [P04637]
  • Belongs to the pore-forming pnc-27 peptide of 32 aas from the p53 tumor suppressor protein (pnc-27) family according to TCDB.
  • Domain organization of [P53_HUMAN] by SWISSPFAM
  • Other resources with information on 1OLG
  • Community annotation for 1OLG at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 1OLG from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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