1OOF	Transport Protein	date	Mar 03, 2003
title	Complex Of Drosophila Odorant Binding Protein Lush With Ethanol
authors	S.W.Kruse, R.Zhao, D.P.Smith, D.N.M.Jones
compound		source
Molecule: Odorant Binding Protein Lush Chain: A, B Engineered: Yes		Organism_scientific: Drosophila Melanogaster Organism_common: Fruit Fly Organism_taxid: 7227 Strain: Oregon R Tissue: Subset Of Trichoid Olfactory Sensilla Gene: Lush Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21 (De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet28a
symmetry	Space Group: P 43	R_factor 0.178 R_Free 0.210
crystal cell	length a length b length c angle alpha angle beta angle gamma 46.942 46.942 111.540 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.49 Å
ligand	ACT, EOH	enzyme
related structures	by homologous chain: 1OOG, 1T14
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structure of a specific alcohol-binding site defined by the odorant binding protein LUSH from Drosophila melanogaster., Kruse SW, Zhao R, Smith DP, Jones DN, Nat Struct Biol 2003 Sep;10(9):694-700. Epub 2003 Jul 27. PMID:12881720

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (50 Kb) [Save to disk] Biological Unit Coordinates (1oof.pdb1.gz) 24 Kb Biological Unit Coordinates (1oof.pdb2.gz) 24 Kb LPC: Ligand-Protein Contacts for 1OOF CSU: Contacts of Structural Units for 1OOF Likely Quarternary Molecular Structure file(s) for 1OOF Retrieve 1OOF in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1OOF from S2C, [Save to disk]

View 1OOF in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1OOF

Ramachandran plot from PDBSum

Structure-derived information

Conformational Epitope Prediction for 1OOF 1OOFA 1OOFB from the CEP Server. Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1OOF, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1oofa_, region A [Jmol] [rasmolscript] [script source]     - Domain d1oofb_, region B [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1oof] [1oof_A] [1oof_B] SWISS-PROT database: [O02372] Domain organization of [OB76A_DROME] by SWISSPFAM Domain found in 1OOF: [PhBP ] by SMART

Other resources with information on 1OOF

Community annotation for 1OOF at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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