1OSZ	Complex (Mhc I Peptide)	date	Jun 18, 1998
title	Mhc Class I H-2kb Heavy Chain Complexed With Beta-2 Microglo An (L4v) Mutant Of The Vesicular Stomatitis Virus Nucleopro
authors	Y.Ghendler, M.K.Teng, J.H.Liu, T.Witte, J.Liu, K.S.Kim, P.Kern, H C.Chang, J.H.Wang, E.L.Reinherz
compound		source
Molecule: Mhc Class I H-2kb Heavy Chain Chain: A Fragment: Extracellular Domains Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Strain: H-2b Cell_line: Bl21 Gene: H-2b Beta2m Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21 Plyss (Novagen) Expression_system_plasmid: Pet-3a Expression_system_gene: H-2b, Beta2m
Molecule: Beta-2 Microglobulin Chain: B Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Strain: H-2b Cell_line: Bl21 Gene: H-2b Beta2m Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21 Plyss (Novagen) Expression_system_plasmid: Pet-3a Expression_system_gene: H-2b, Beta2m
Molecule: Vesicular Stomatitis Virus Nucleoprotein Chain: C Fragment: Residues 52 - 59 Synonym: Vsv-8 Engineered: Yes Mutation: Yes
symmetry	Space Group: P 21 21 2	R_factor 0.248 R_Free 0.293
crystal cell	length a length b length c angle alpha angle beta angle gamma 136.700 88.000 45.300 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.10 Å
related structures	by homologous chain: 1PQZ, 1W72, 2BST
Gene Ontology	Chain Function Process Component B
Primary reference	Differential thymic selection outcomes stimulated by focal structural alteration in peptide/major histocompatibility complex ligands., Ghendler Y, Teng MK, Liu JH, Witte T, Liu J, Kim KS, Kern P, Chang HC, Wang JH, Reinherz EL, Proc Natl Acad Sci U S A 1998 Aug 18;95(17):10061-6. PMID:9707600

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (67 Kb) [Save to disk] Biological Unit Coordinates (1osz.pdb1.gz) 63 Kb CSU: Contacts of Structural Units for 1OSZ Likely Quarternary Molecular Structure file(s) for 1OSZ Structure Factors (237 Kb) Retrieve 1OSZ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1OSZ from S2C, [Save to disk] Re-refined 1osz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1OSZ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1OSZ

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1OSZ, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1osza2, region A:1-181 [Jmol] [rasmolscript] [script source]     - Domain d1osza1, region A:182-274 [Jmol] [rasmolscript] [script source]     - Domain d1oszb_, region B [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1osz] [1osz_C] [1osz_B] [1osz_A] SWISS-PROT database: [P01887] [P01901] Domain organization of [B2MG_MOUSE] [HA1B_MOUSE] by SWISSPFAM Domain found in 1OSZ: [IGc1 ] by SMART

Other resources with information on 1OSZ

Community annotation for 1OSZ at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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