1OZS Structural Protein date Apr 09, 2003
title C-Domain Of Human Cardiac Troponin C In Complex With The Inhibitory Region Of Human Cardiac Troponin I
authors D.A.Lindhout, B.D.Sykes
compound source
Molecule: Troponin C, Slow Skeletal And Cardiac Muscles
Chain: A
Synonym: Tn-C
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Tnnc1 Or Tnnc
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21 De3 (Plyss)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet

Molecule: Troponin I, Cardiac Muscle
Chain: B
Synonym: Cip
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Tnni3 Or Tnnc1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21 De3 (Plyss)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet
methodSolution NMR
ligand CA enzyme
related structures by homologous chain: 1CTD, 1IH0
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceStructure and dynamics of the C-domain of human cardiac troponin C in complex with the inhibitory region of human cardiac troponin I., Lindhout DA, Sykes BD, J Biol Chem 2003 Jul 18;278(29):27024-34. PMID:12732641
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (777 Kb) [Save to disk]
  • LPC: Ligand-Protein Contacts for 1OZS
  • CSU: Contacts of Structural Units for 1OZS
  • Original NMR restraints for 1OZS from PDB
  • Retrieve 1OZS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1OZS from S2C, [Save to disk]
  • View 1OZS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1OZS
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1OZS, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ozsa_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1ozs from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ozs] [1ozs_B] [1ozs_A]
  • SWISS-PROT database: [P63316] [P19429]
  • Domain organization of [TNNC1_HUMAN] [TNNI3_HUMAN] by SWISSPFAM
  • Domain found in 1OZS: [EFh ] by SMART
  • Alignments of the sequence of 1OZS with the sequences similar proteins can be viewed for 1OZS's classification [TNNC1_HUMAN] [TNNI3_HUMAN] at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list.
  • A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification [TNNC1_HUMAN] [TNNI3_HUMAN] at ProtoMap. Click on the Cluster number.
  • Other resources with information on 1OZS
  • Community annotation for 1OZS at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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