1P32 Mitochondrial Matrix Protein date Nov 02, 1998
title Crystal Structure Of Human P32, A Doughnut-Shaped Acidic Mit Matrix Protein
authors J.Jiang, Y.Zhang, A.R.Krainer, R.M.Xu
compound source
Molecule: Mitochondrial Matrix Protein, Sf2p32
Chain: A, B, C
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.173 R_Free 0.234
crystal
cell
length a length b length c angle alpha angle beta angle gamma
58.625 56.481 93.831 90.00 95.99 90.00
method X-Ray Diffractionresolution 2.25 Å
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referenceCrystal structure of human p32, a doughnut-shaped acidic mitochondrial matrix protein., Jiang J, Zhang Y, Krainer AR, Xu RM, Proc Natl Acad Sci U S A 1999 Mar 30;96(7):3572-7. PMID:10097078
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (97 Kb) [Save to disk]
  • Biological Unit Coordinates (1p32.pdb1.gz) 93 Kb
  • CSU: Contacts of Structural Units for 1P32
  • Likely Quarternary Molecular Structure file(s) for 1P32
  • Retrieve 1P32 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1P32 from S2C, [Save to disk]
  • View 1P32 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1P32
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1P32, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1p32a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1p32b_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1p32c_, region C [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1p32_C] [1p32_A] [1p32_B] [1p32]
  • SWISS-PROT database: [Q07021]
  • Belongs to the putative ca(2+) uniporter (gc1qr) family according to TCDB.
  • Domain organization of [C1QBP_HUMAN] by SWISSPFAM
  • Other resources with information on 1P32
  • Community annotation for 1P32 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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