1P5G date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand G6P, SEP, ZN enzyme
related structures by homologous chain: 1K2Y, 1P5D
Gene
Ontology
ChainFunctionProcessComponent
X


Primary referenceStructural basis of diverse substrate recognition by the enzyme PMM/PGM from P. aeruginosa., Regni C, Naught L, Tipton PA, Beamer LJ, Structure (Camb) 2004 Jan;12(1):55-63. PMID:14725765
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (84 Kb) [Save to disk]
  • Biological Unit Coordinates (1p5g.pdb1.gz) 78 Kb
  • LPC: Ligand-Protein Contacts for 1P5G
  • CSU: Contacts of Structural Units for 1P5G
  • Likely Quarternary Molecular Structure file(s) for 1P5G
  • Structure Factors (426 Kb)
  • Retrieve 1P5G in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1P5G from S2C, [Save to disk]
  • Re-refined 1p5g structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1P5G in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1P5G
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1P5G, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1p5gx2, region X:155-258 [Jmol] [rasmolscript] [script source]
        - Domain d1p5gx3, region X:259-367 [Jmol] [rasmolscript] [script source]
        - Domain d1p5gx4, region X:368-463 [Jmol] [rasmolscript] [script source]
        - Domain d1p5gx1, region X:9-154 [Jmol] [rasmolscript] [script source]
  • Fold representative 1p5g from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1p5g] [1p5g_X]
  • SWISS-PROT database: [P26276]
  • Domain organization of [ALGC_PSEAE] by SWISSPFAM
    • Other resources with information on 1P5G
  • Community annotation for 1P5G at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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