1PBC Oxidoreductase date Jul 06, 1994
title Crystal Structures Of Wild-Type P-Hydroxybenzoate Hydroxylas Complexed With 4-Aminobenzoate, 2,4-Dihydroxybenzoate And 2 4-Aminobenzoate And Of The Try222ala Mutant, Complexed With Hydroxy-4-Aminobenzoate. Evidence For A Proton Channel And Binding Mode Of The Flavin Ring
authors H.A.Schreuder, F.J.T.Van Der Bolt, W.J.H.Van Berkel
compound source
Molecule: P-Hydroxybenzoate Hydroxylase
Chain: A
Ec: 1.14.13.2
Engineered: Yes
Organism_scientific: Pseudomonas Fluorescens
Organism_taxid: 294
symmetry Space Group: C 2 2 21
R_factor 0.145 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
72.200 146.300 88.800 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.80 Å
ligand BHA, FAD enzyme Oxidoreductase E.C.1.14.13.2 BRENDA
related structures by homologous chain: 1BGJ, 1CJ2
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structures of wild-type p-hydroxybenzoate hydroxylase complexed with 4-aminobenzoate,2,4-dihydroxybenzoate, and 2-hydroxy-4-aminobenzoate and of the Tyr222Ala mutant complexed with 2-hydroxy-4-aminobenzoate. Evidence for a proton channel and a new binding mode of the flavin ring., Schreuder HA, Mattevi A, Obmolova G, Kalk KH, Hol WG, van der Bolt FJ, van Berkel WJ, Biochemistry 1994 Aug 23;33(33):10161-70. PMID:7520279
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (73 Kb) [Save to disk]
  • Biological Unit Coordinates (1pbc.pdb1.gz) 135 Kb
  • LPC: Ligand-Protein Contacts for 1PBC
  • CSU: Contacts of Structural Units for 1PBC
  • Likely Quarternary Molecular Structure file(s) for 1PBC
  • Structure Factors (132 Kb)
  • Retrieve 1PBC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1PBC from S2C, [Save to disk]
  • Re-refined 1pbc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1PBC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1PBC
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1PBC, from MSDmotif at EBI
  • Genome occurence of 1PBC's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1pbc_1, region 1-173,276-391 [Jmol] [rasmolscript] [script source]
        - Domain d1pbc_2, region 174-275 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1pbc] [1pbc_A]
  • SWISS-PROT database: [P00438]
  • Domain organization of [PHHY_PSEFL] by SWISSPFAM
  • Other resources with information on 1PBC
  • Community annotation for 1PBC at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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