1PBU Translation date May 15, 2003
title Solution Structure Of The C-Terminal Domain Of The Human Eef Subunit
authors S.Vanwetswinkel, J.Kriek, G.R.Andersen, P.Guntert, J.Dijk, G.W.Ca G.Siegal
compound source
Molecule: Elongation Factor 1-Gamma
Chain: A
Fragment: C-Terminal Domain (Residues 276-437)
Synonym: Ef-1-Gamma, Eef-1b Gamma, Pro1608
Engineered: Yes
Mutation: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Eef1g Or Ef1g
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet16b
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary reference1H, 15N and 13C resonance assignments of the highly conserved 19 kDa C-terminal domain from human elongation factor 1Bgamma., Vanwetswinkel S, Kriek J, Andersen GR, Dijk J, Siegal G, J Biomol NMR 2003 Jun;26(2):189-90. PMID:12766415
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (878 Kb) [Save to disk]
  • Biological Unit Coordinates (1pbu.pdb1.gz) 43 Kb
  • CSU: Contacts of Structural Units for 1PBU
  • Original NMR restraints for 1PBU from PDB
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1PBU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1PBU from S2C, [Save to disk]
    • View 1PBU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1PBU
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1PBU, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1pbua_, region A [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1pbu_A] [1pbu]
  • SWISS-PROT database: [P26641]
  • Domain organization of [EF1G_HUMAN] by SWISSPFAM
  • Domain found in 1PBU: [EF1G ] by SMART
    • Other resources with information on 1PBU
  • Community annotation for 1PBU at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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