1PDO date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
related structures by homologous chain: 1VRC
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure of the IIA domain of the mannose transporter from Escherichia coli at 1.7 angstroms resolution., Nunn RS, Markovic-Housley Z, Genovesio-Taverne JC, Flukiger K, Rizkallah PJ, Jansonius JN, Schirmer T, Erni B, J Mol Biol 1996 Jun 14;259(3):502-11. PMID:8676384
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (26 Kb) [Save to disk]
  • Biological Unit Coordinates (1pdo.pdb1.gz) 43 Kb
  • CSU: Contacts of Structural Units for 1PDO
  • Likely Quarternary Molecular Structure file(s) for 1PDO
  • Structure Factors (123 Kb)
  • Retrieve 1PDO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1PDO from S2C, [Save to disk]
  • Re-refined 1pdo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1PDO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1pdo] [1pdo_A]
  • SWISS-PROT database: [P69797]
  • Belongs to the pts mannose-fructose-sorbose (man) family according to TCDB.

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