1PLW Neuropeptide date Jun 09, 2003
title Nmr Structure Of Methionine-Enkephalin In Fast Tumbling Dmpcdhpc Bicelles
authors I.Marcotte, F.Separovic, M.Auger, S.M.Gagne
compound source
Molecule: Met-Enkephalin 1
Chain: A
Engineered: Yes
 Synthetic: Yes
Other_details: The Pepetide Was Chemically Synthesized. The Sequence Of The Peptide Is Naturally Found In Homo Sapiens (Human)
methodSolution NMR
Primary referenceA multidimensional (1)h NMR investigation of the conformation of methionine-enkephalin in fast-tumbling bicelles., Marcotte I, Separovic F, Auger M, Gagne SM, Biophys J 2004 Mar;86(3):1587-600. PMID:14990485
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (73 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 1PLW
  • Original NMR restraints for 1PLW from PDB
  • Retrieve 1PLW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1PLW from S2C, [Save to disk]
    • View 1PLW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • On AstexViewer, from MSD-EBI (viewer documentation).
  • On RasMol (Install RasMol freeware) Here's help on how to use RasMol.
    • Visual 3D analysis of 1PLW
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1PLW, from MSDmotif at EBI
  • Fold representative 1plw from FSSP and Dali (Families of Structurally Similar Proteins)
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1plw_A]
  • SWISS-PROT database: [P01210]
  • Belongs to the dynorphin channel-forming neuropeptide (dynorphin) family according to TCDB.
  • Domain organization of [PENK_HUMAN] by SWISSPFAM
  • Alignments of the sequence of 1PLW with the sequences similar proteins can be viewed for 1PLW's classification [PENK_HUMAN] at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list.
  • A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification [PENK_HUMAN] at ProtoMap. Click on the Cluster number.
    • Other resources with information on 1PLW
  • Community annotation for 1PLW at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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