1X82	Metal Binding Protein	date	Aug 17, 2004
title	Crystal Structure Of Phosphoglucose Isomerase From Pyrococcu With Bound 5-Phospho-D-Arabinonate
authors	J.M.Berrisford, J.Akerboom, S.Brouns, S.E.Sedelnikova, A.P.Turnb Der Oost, L.Salmon, R.Hardre, I.A.Murray, G.M.Blackburn, D.W.Ric P.J.Baker
compound		source
Molecule: Glucose-6-Phosphate Isomerase Chain: A Synonym: Gpi, Phosphoglucose Isomerase, Pgi, Phosphohexose Phi; Ec: 5.3.1.9 Engineered: Yes		Organism_scientific: Pyrococcus Furiosus Organism_taxid: 2261 Gene: Pgia Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet24-D
symmetry	Space Group: C 1 2 1	R_factor 0.161 R_Free 0.208
crystal cell	length a length b length c angle alpha angle beta angle gamma 84.506 42.730 57.308 90.00 120.32 90.00
method	X-Ray Diffraction	resolution	1.50 Å
ligand	MSE, PA5	enzyme	Isomerase E.C.5.3.1.9 BRENDA
note	1X82 is a representative structure and supersedes 1PLZ
related structures	by homologous chain: 1QXR
Gene Ontology	Chain Function Process Component A
Primary reference	The Structures of Inhibitor Complexes of Pyrococcus furiosus Phosphoglucose Isomerase Provide Insights into Substrate Binding and Catalysis., Berrisford JM, Akerboom J, Brouns S, Sedelnikova SE, Turnbull AP, van der Oost J, Salmon L, Hardre R, Murray IA, Blackburn GM, Rice DW, Baker PJ, J Mol Biol 2004 Oct 22;343(3):649-57. PMID:15465052

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (41 Kb) [Save to disk] Biological Unit Coordinates (1x82.pdb1.gz) 71 Kb LPC: Ligand-Protein Contacts for 1X82 CSU: Contacts of Structural Units for 1X82 Likely Quarternary Molecular Structure file(s) for 1X82 Structure Factors (183 Kb) Retrieve 1X82 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1X82 from S2C, [Save to disk] Re-refined 1x82 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1X82 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1X82

Ramachandran plot from PDBSum

Structure-derived information

Conformational Epitope Prediction for 1X82 from the CEP Server. Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1X82, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1x82a_, region A [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1x82_A] [1x82] SWISS-PROT database: [P83194] Domain organization of [G6PI_PYRFU] by SWISSPFAM

Other resources with information on 1X82

Community annotation for 1X82 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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