1PPC date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CA, MID BindingDB enzyme
Gene
Ontology
ChainFunctionProcessComponent
E


Primary referenceGeometry of binding of the benzamidine- and arginine-based inhibitors N alpha-(2-naphthyl-sulphonyl-glycyl)-DL-p-amidinophenylalanyl-pipe ridine (NAPAP) and (2R,4R)-4-methyl-1-[N alpha-(3-methyl-1,2,3,4-tetrahydro-8- quinolinesulphonyl)-L-arginyl]-2-piperidine carboxylic acid (MQPA) to human alpha-thrombin. X-ray crystallographic determination of the NAPAP-trypsin complex and modeling of NAPAP-thrombin and MQPA-thrombin., Bode W, Turk D, Sturzebecher J, Eur J Biochem 1990 Oct 5;193(1):175-82. PMID:2226434
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (42 Kb) [Save to disk]
  • Biological Unit Coordinates (1ppc.pdb1.gz) 37 Kb
  • LPC: Ligand-Protein Contacts for 1PPC
  • CSU: Contacts of Structural Units for 1PPC
  • Likely Quarternary Molecular Structure file(s) for 1PPC
  • Retrieve 1PPC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1PPC from S2C, [Save to disk]
  • View 1PPC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ppc] [1ppc_E] [1ppc_I]
  • SWISS-PROT database: [P00760]
  • Domain found in 1PPC: [Tryp_SPc ] by SMART

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science