| Data retrieval |
- Asymmetric unit, PDB entry:
[header only] [complete with coordinates] (33 Kb) [Save to disk]
 - Biological Unit Coordinates (1pub.pdb1.gz) 28 Kb
- LPC: Ligand-Protein Contacts for 1PUB
- CSU: Contacts of Structural Units for 1PUB
- Likely Quarternary Molecular Structure file(s) for 1PUB
- Structure Factors (78 Kb)
- Retrieve 1PUB in mmCIF format [Save to disk]
- SEQRES to COORDINATES
correlation for 1PUB
from S2C,
[Save to disk]
- Re-refined 1pub structure
from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
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| View 1PUB in 3D |
-
Proteopedia, because life has more than 2D.
- On Jmol, a nice Rasmol like molecule viewer.
This is good for easiest viewing of basic structure.
- On FirstGlance, an
excellent tool for a guided tour on the structure components, by
E. Martz.
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| Visual 3D analysis of 1PUB |
- Ramachandran
plot from PDBSum
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| Structure-derived information |
- Electron Density
related parameters from EDS Electron Density Server, at Upsala
- Dipole moment, from Dipole Server at Weizmann Institute
- 3D motif for 1PUB,
from MSDmotif at EBI
- Classification of representative domains in scop (Structural Classification of Proteins)
- Domain d1puba_, region A
[Jmol]
[rasmolscript]
[script source]
- Class (fold), Architecture (subfold), Topology, Homologous superfamily from
CATH
- Summaries and structural analyses of PDB data files from
PDBSum
- Identification of Protein Pockets & Cavities at
CASTp
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| Sequence-derived information |
- View one-letter amino acid or nucleotide sequence for each chain: [1pub_A] [1pub]
- SWISS-PROT database: [P17900]
- Domain organization of [SAP3_HUMAN] by SWISSPFAM
- Domain found in 1PUB: [ML
] by SMART
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Other resources with information on 1PUB |
- Community annotation for 1PUB at PDBWiki (http://pdbwiki.org)
- MMDB (Entrez's Structure Database)
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| Movements, Movies and Images |
- Images
from IMB Jena Image Library
of Biological Macromolecules.
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