OCA Atlas for 1PY4

1PY4

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

related structures

by homologous chain: 1B0R, 1CE6

Gene
Ontology

Chain	Function	Process	Component
D, C, A, B		cellular response to iron io...

Primary reference

beta2-microglobulin H31Y variant 3D structure highlights the protein natural propensity towards intermolecular aggregation., Rosano C, Zuccotti S, Mangione P, Giorgetti S, Bellotti V, Pettirossi F, Corazza A, Viglino P, Esposito G, Bolognesi M, J Mol Biol 2004 Jan 23;335(4):1051-64. PMID:14698299

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (75 Kb) [Save to disk]

Biological Unit Coordinates (1py4.pdb1.gz) 18 Kb

Biological Unit Coordinates (1py4.pdb2.gz) 18 Kb

Biological Unit Coordinates (1py4.pdb3.gz) 20 Kb

Biological Unit Coordinates (1py4.pdb4.gz) 18 Kb

CSU: Contacts of Structural Units for 1PY4

Likely Quarternary Molecular Structure file(s) for 1PY4

Structure Factors (155 Kb)

Retrieve 1PY4 in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 1PY4 from S2C, [Save to disk]

Re-refined 1py4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1PY4 in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1py4] [1py4_A] [1py4_B] [1py4_C] [1py4_D]

SWISS-PROT database: [P61769]

Domain found in 1PY4: [IGc1 ] by SMART

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]