1Q84 Hydrolase date Aug 20, 2003
title Crystal Structure Of The Mouse Acetylcholinesterase-Tz2pa6 A Complex
authors Y.Bourne, H.C.Kolb, Z.Radic, K.B.Sharpless, P.Taylor, P.Marchot
compound source
Molecule: Acetylcholinesterase
Chain: A, B
Synonym: Ache
Ec: 3.1.1.7
Engineered: Yes
Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090
Gene: Ache
Expression_system: Homo Sapiens
Expression_system_common: Human
Expression_system_taxid: 9606
Expression_system_cell_line: Hek 293
Expression_system_vector_type: Virus
Expression_system_vector: Lambda-Zap, Lambda-Fix
symmetry Space Group: P 21 21 21
R_factor 0.184 R_Free 0.214
crystal
cell
length a length b length c angle alpha angle beta angle gamma
79.272 111.765 227.171 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.45 Å
ligand NAG, P6G, TZ4 BindingDB enzyme Hydrolase E.C.3.1.1.7 BRENDA
related structures by homologous chain: 1J06, 1KU6
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceFreeze-frame inhibitor captures acetylcholinesterase in a unique conformation., Bourne Y, Kolb HC, Radic Z, Sharpless KB, Taylor P, Marchot P, Proc Natl Acad Sci U S A 2004 Feb 10;101(6):1449-54. Epub 2004 Feb 2. PMID:14757816
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (181 Kb) [Save to disk]
  • Biological Unit Coordinates (1q84.pdb1.gz) 173 Kb
  • LPC: Ligand-Protein Contacts for 1Q84
  • CSU: Contacts of Structural Units for 1Q84
  • Likely Quarternary Molecular Structure file(s) for 1Q84
  • Structure Factors (545 Kb)
  • Retrieve 1Q84 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1Q84 from S2C, [Save to disk]
  • Re-refined 1q84 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1Q84 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1Q84
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1Q84, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1q84a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1q84b_, region B [Jmol] [rasmolscript] [script source]
  • Fold representative 1q84 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1q84_A] [1q84] [1q84_B]
  • SWISS-PROT database: [P21836]
  • Domain organization of [ACES_MOUSE] by SWISSPFAM
  • Other resources with information on 1Q84
  • Community annotation for 1Q84 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science