1QK1 Transferase (Creatine Kinase) date Jul 08, 1999
title Crystal Structure Of Human Ubiquitous Mitochondrial Creatine
authors M.Eder, U.Schlattner, K.Fritz-Wolf, T.Wallimann, W.Kabsch
compound source
Molecule: Creatine Kinase, Ubiquitous Mitochondrial
Chain: A, B, C, D, E, F, G, H
Synonym: Umtck, Mia-Ck
Ec: 2.7.3.2
Engineered: Yes
Other_details: Recombinant Human Umtck Has An Additional Al N-Terminus
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Tissue: Placenta
Cellular_location: Mitochondrial Inner Membrane
Gene: Genbank Accession J04469 Gene: Genbank Accession J044
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_variant: Plyss
Expression_system_vector_type: Plasmid
Expression_system_vector: Pet-3b
Expression_system_plasmid: Pus04
symmetry Space Group: P 1 21 1
R_factor 0.195 R_Free 0.219
crystal
cell
length a length b length c angle alpha angle beta angle gamma
91.811 125.868 212.074 90.00 96.71 90.00
method X-Ray Diffractionresolution 2.70 Å
ligand PO4 enzyme Transferase E.C.2.7.3.2 BRENDA
related structures by homologous chain: 1CRK, 2CRK
Gene
Ontology
ChainFunctionProcessComponent
F, A, E, B, H, C, D, G


Primary referenceCrystal structure of human ubiquitous mitochondrial creatine kinase., Eder M, Fritz-Wolf K, Kabsch W, Wallimann T, Schlattner U, Proteins. 2000 May 15;39(3):216-25. PMID:10737943
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (488 Kb) [Save to disk]
  • Biological Unit Coordinates (1qk1.pdb1.gz) 483 Kb
  • LPC: Ligand-Protein Contacts for 1QK1
  • CSU: Contacts of Structural Units for 1QK1
  • Likely Quarternary Molecular Structure file(s) for 1QK1
  • Structure Factors (670 Kb)
  • Retrieve 1QK1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1QK1 from S2C, [Save to disk]
  • Re-refined 1qk1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1QK1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1QK1
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1QK1, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1qk1a1, region A:1-102 [Jmol] [rasmolscript] [script source]
        - Domain d1qk1a2, region A:103-379 [Jmol] [rasmolscript] [script source]
        - Domain d1qk1b1, region B:1-102 [Jmol] [rasmolscript] [script source]
        - Domain d1qk1b2, region B:103-379 [Jmol] [rasmolscript] [script source]
        - Domain d1qk1c1, region C:1-102 [Jmol] [rasmolscript] [script source]
        - Domain d1qk1c2, region C:103-379 [Jmol] [rasmolscript] [script source]
        - Domain d1qk1d1, region D:1-102 [Jmol] [rasmolscript] [script source]
        - Domain d1qk1d2, region D:103-379 [Jmol] [rasmolscript] [script source]
        - Domain d1qk1e1, region E:1-102 [Jmol] [rasmolscript] [script source]
        - Domain d1qk1e2, region E:103-379 [Jmol] [rasmolscript] [script source]
        - Domain d1qk1f1, region F:1-102 [Jmol] [rasmolscript] [script source]
        - Domain d1qk1f2, region F:103-379 [Jmol] [rasmolscript] [script source]
        - Domain d1qk1g1, region G:1-102 [Jmol] [rasmolscript] [script source]
        - Domain d1qk1g2, region G:103-379 [Jmol] [rasmolscript] [script source]
        - Domain d1qk1h1, region H:1-102 [Jmol] [rasmolscript] [script source]
        - Domain d1qk1h2, region H:103-379 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1qk1_H] [1qk1] [1qk1_C] [1qk1_E] [1qk1_G] [1qk1_F] [1qk1_A] [1qk1_D] [1qk1_B]
  • SWISS-PROT database: [P12532]
  • Domain organization of [KCRU_HUMAN] by SWISSPFAM
  • Other resources with information on 1QK1
  • Community annotation for 1QK1 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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