1QLY Tyrosine-Protein Kinase date Sep 20, 1999
title Nmr Study Of The Sh3 Domain From Bruton'S Tyrosine Kinase, 20 Structures
authors S.R.Tzeng, Y.C.Lou, M.T.Pai, C.Chen, S.H.Chen, J.Y.Cheng
compound source
Molecule: Tyrosine-Protein Kinase Btk
Chain: A
Fragment: Sh3 Domain Residues 216 - 273
Synonym: Brutons Tyrosine Kinase, B Cell Progenitor Kinase, Bpk, Agammaglobulinaemia Tyrosine Kinase, Atk;
Ec: 2.7.1.112
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Tissue: Blood
Expression_system: Escherichia Coli
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_cellular_location: Cytoplasm
Expression_system_plasmid: Pet21b
methodSolution NMR
ligand
enzyme Transferase E.C.2.7.1.112 BRENDA
related structures by homologous chain: 1AWX, 1GL5
Primary referenceSolution structure of the human BTK SH3 domain complexed with a proline-rich peptide from p120cbl., Tzeng SR, Lou YC, Pai MT, Jain ML, Cheng JW, J Biomol NMR 2000 Apr;16(4):303-12. PMID:10826882
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (317 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 1QLY
  • Original NMR restraints for 1QLY from PDB
  • Retrieve 1QLY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1QLY from S2C, [Save to disk]
  • View 1QLY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1QLY
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1QLY, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1qlya_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1qly] [1qly_A]
  • SWISS-PROT database: [Q06187]
  • Domain organization of [BTK_HUMAN] by SWISSPFAM
  • Domain found in 1QLY: [SH3 ] by SMART
  • Other resources with information on 1QLY
  • Community annotation for 1QLY at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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