1QM7 X-ray structure of a three-fingered chimeric protein, stability of a structural scaffold date
authors Du, M.H.Le., Ricciardi, A., Khayati, M., Menez, R., Boulain, J.C., Menez, A., Ducancel, F.
compound source
symmetry
R_factor
R_Free 0.221
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.10
related structures by homologous chain: 1FSC, 1KU6
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStability of a structural scaffold upon activity transfer: X-ray structure of a three fingers chimeric protein., Le Du MH, Ricciardi A, Khayati M, Menez R, Boulain JC, Menez A, Ducancel F, J Mol Biol 2000 Mar 3;296(4):1017-26. PMID:10686100
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (15 Kb) [Save to disk]
  • Biological Unit Coordinates (1qm7.pdb1.gz) 21 Kb
  • CSU: Contacts of Structural Units for 1QM7
  • Likely Quarternary Molecular Structure file(s) for 1QM7
  • Retrieve 1QM7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1QM7 from S2C, [Save to disk]
    • View 1QM7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1QM7
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1QM7, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1qm7a_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1qm7] [1qm7_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 1QM7
  • Community annotation for 1QM7 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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