1QMR	BIRCH POLLEN ALLERGEN BET V 1 MUTANT N28T, K32Q, E45S, P108G	date
authors	Henriksen, A., Holm, J.O., Spangfort, M.D., Gajhede, M.
compound		source
symmetry		R_factor R_Free 0.238
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	2.15
related structures	by homologous chain: 1BV1, 1FSK
Gene Ontology	Chain Function Process Component A protein phosphatase inhibito...
Primary reference	Allergy vaccine engineering: epitope modulation of recombinant Bet v 1 reduces IgE binding but retains protein folding pattern for induction of protective blocking-antibody responses., Holm J, Gajhede M, Ferreras M, Henriksen A, Ipsen H, Larsen JN, Lund L, Jacobi H, Millner A, Wurtzen PA, Spangfort MD, J Immunol. 2004 Oct 15;173(8):5258-67. PMID:15470071

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (30 Kb) [Save to disk] Biological Unit Coordinates (1qmr.pdb1.gz) 52 Kb CSU: Contacts of Structural Units for 1QMR Likely Quarternary Molecular Structure file(s) for 1QMR Structure Factors (70 Kb) Retrieve 1QMR in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1QMR from S2C, [Save to disk] Re-refined 1qmr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1QMR in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1QMR

Cartoon representation from PDB Cartoon Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute 3D motif for 1QMR, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1qmra_, region A [Jmol] [rasmolscript] [script source] Fold representative 1qmr from FSSP and Dali (Families of Structurally Similar Proteins) Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1qmr] [1qmr_A] SWISS-PROT database: [P15494] Domain organization of [BEV1A_BETVE] by SWISSPFAM

Other resources with information on 1QMR

Community annotation for 1QMR at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

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