1QYL Dna date Sep 11, 2003
title Gcatgct + Vanadium
authors C.J.Cardin, Y.Gan, J.H.Thorpe, S.C.M.Teixeira, B.C.Gale, M.I.A.Mo
compound source
Molecule: 5'-D(Gpcpaptpgpcpt)-3'
Chain: A
Engineered: Yes
 Synthetic: Yes
symmetry Space Group: C 2 2 2
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
22.532 58.469 24.148 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.00 Å
ligand V enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (11 Kb) [Save to disk]
  • Biological Unit Coordinates (1qyl.pdb1.gz) 12 Kb
  • LPC: Ligand-Protein Contacts for 1QYL
  • CSU: Contacts of Structural Units for 1QYL
  • Likely Quarternary Molecular Structure file(s) for 1QYL
  • Structure Factors (88 Kb)
  • Retrieve 1QYL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1QYL from S2C, [Save to disk]
  • Re-refined 1qyl structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1QYL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1QYL
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1QYL, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1qyl_A] [1qyl]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 1QYL
  • Community annotation for 1QYL at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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