1RBN Hydrolase(Nucleic Acid,Rna) date Mar 29, 1994
title The Structure Of Ribonuclease A Derivative II At 2.1 Angstroms Resolution
authors L.Boque, I.Fita
compound source
Molecule: Ribonuclease A
Chain: A
Ec: 3.1.27.5
Engineered: Yes
 Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
Organ: Liver
Tissue: Liver
symmetry Space Group: C 2 2 21
R_factor 0.166 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
75.730 57.850 53.260 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.10 Å
ligand P5P enzyme Hydrolase E.C.3.1.27.5 BRENDA
related structures by homologous chain: 11BA, 4RSK
Gene
Ontology
ChainFunctionProcessComponent
A
  • ribonuclease A activity


    • Primary referenceStructure of ribonuclease A derivative II at 2.1-A resolution., Boque L, Gracia Coll M, Vilanova M, Cuchillo CM, Fita I, J Biol Chem 1994 Aug 5;269(31):19707-12. PMID:8051049
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (27 Kb) [Save to disk]
  • Biological Unit Coordinates (1rbn.pdb1.gz) 23 Kb
  • LPC: Ligand-Protein Contacts for 1RBN
  • CSU: Contacts of Structural Units for 1RBN
  • Likely Quarternary Molecular Structure file(s) for 1RBN
  • Retrieve 1RBN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1RBN from S2C, [Save to disk]
    • View 1RBN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1RBN
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1RBN, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1rbn__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1rbn_A] [1rbn]
  • SWISS-PROT database: [P61823]
  • Domain organization of [RNAS1_BOVIN] by SWISSPFAM
  • Domain found in 1RBN: [RNAse_Pc ] by SMART
    • Other resources with information on 1RBN
  • Community annotation for 1RBN at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Domain movements in 1RBN from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science